Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947193.1_cds_XP_016489001.1_79581
CDS Infomation

[gene=LOC107808956] [db_xref=GeneID:107808956] [protein=65-kDa microtubule-associated protein 6-like] [protein_id=XP_016489001.1] [location=complement(join(178059..178394,178515..178589,178671..178744,178828..178915,179071..179222,179307..179466,179801..179956,180023..180238,180420..180683,181305..181508,182621..182701))] [gbkey=CDS]
Sequence

ATGCTGGCTTTTGGAAGTCCTAATTGTAACAATATTGGGTTTACAAGCTCTAGTTGCCAC
ACTTTACGTAGAGAACTGCAGCAAATATGGACCGATATTGGAGAGAGTGAATCTGATAAA
GACCGTATGCTGTTGGAGCTGGAAAGAGAGTGTATGGAAGTCTACCGAAGAAAAGTTGAA
GAAGCGGCCAATGCAAAAGCACGTCTTCATCAATCTGTTGCAGCTAAAGAAGCTGAGCTC
GCTACCTTAATGGCTGCTCTTGGCGAACTCAACATTAATTCACCGATACAGTCAGAGAAA
AAATCAGCTCCACTGAAGGAGCAGCTTGGGTTAATCATGCCTCTTGTAGATGATTTAAAA
GCTAAGAAAGATGAAAGAGTTAAGCAGTTCGGAGATATAAAGGCGCAAATTGAGAAAATA
ACTGGTGAGATTTCAGGGTGTTGTAATATTGTCAATTCTCTGAGTAGCTTAAACTTGGAA
GAACATGACTTGTCAATGAGAAAGCTCTCGGAATGCCAATCCCATCTACTTGCTCTCCAA
AAGGAGAAGTCTGTGCGGATCCAAAGAGTTCTGTACAGTGTGAATGAGGTTCACACTTTG
TGCGGTGTACTTGGGCTGGATTTTAGCAAAACTGTAAGTAATGTGCATCCAAGCTTGCAT
GAGACAAACCCTGGACAATACACAAACATCAGTGACAGCACATCGGAAGGTCTAGACCAG
GCCATCCTTGGATTGAAAACAGAACGAAAAGTTCGATATCAGAAGCTAAAGGATGTGGTG
GGATCGCTGTTTGAGCTTTGGAACTTGATGGATACAATGAGAGAAGAAAGGAGTAAGTTA
TCAAGGATCATTTCTGTTCTTGATATTTCTGAATCAGAGGTCGTGGAGCCTGGTGTGCTT
TCATTAGAGGTTATTCAACAGGTATCAGCAGAAGTTGAGAGGCTGAACAAATTGAAAGCA
AGCAGGATGAAGGAGTTGGTCATGAAAAGGAGGGCAGAATTGGAGGACTTGTGCTACAAA
ACCCATATTCAACCTGATCAAAGTACTGCTGCTGATAAATCCAGTGCAATGATCGACTCT
GGTCTTGTGGACCCTTGTGAACTCCTAGCAAATATTGAAGCACAAATAAACAACGTGAAG
GATGAAGCTTTAAGCCGAAAAGAAATTATGGATAGGATAGAGCGGTGGCTTTCAGCATGT
GATGAGGAAAACTGGCTTGAAGATTATAACCGGGATCATACACGTTACAGTGGTGGAAGA
GGTGCTCACATAAATCTAAAGCGGGCAGAACGAGCAAGAATTACAGTGACTAAGATTCCA
GGTATGGTTGACAGTTTGATTAACAAGACACTAGCTTGGGAAGATGAGAAACAGAAGTTG
TTTCTGTACGATGGGGTGAGATTGGTGTCAATATTGGAGGATTACAAAGTTAGTCGACAT
CAGAAAGAAGAGGAGAAGAAACGGGCTCGGGATCAGAAGAAACTCCAAGATATGCTGCTG
GCAGAGAAGGAATCTATATATGGTTCTAGACCTAGTCCGAGAAGAAGCAGCAGCTTTAGG
AAAACGAATGGATACCATGCAAATGGAAATGGGTCAGTCACCCCCTCGCCACGCCGGAAC
TCAGTTGGTTGTGCAACTCCAGAGCTTTCAACACCCCGTTCCTACTCTGGGCGGCAGAAT
ACCTATTTCAAGGAAATGAGAAGACTATCTACTGCCCCTCTCAACTTTGTGGCTATAGCA
AAGGAAGATACAATGTCATTTTCTTCTATTGGAGGTTCTGAGCCAGAATCCCCACCTCAA
GGCTGA

Peptide Sequence

PEP ID

XP_016489001.1
PEP Infomation

PREDICTED: 65-kDa microtubule-associated protein 6-like [Nicotiana tabacum]
Sequence

MLAFGSPNCNNIGFTSSSCHTLRRELQQIWTDIGESESDKDRMLLELERECMEVYRRKVE
EAANAKARLHQSVAAKEAELATLMAALGELNINSPIQSEKKSAPLKEQLGLIMPLVDDLK
AKKDERVKQFGDIKAQIEKITGEISGCCNIVNSLSSLNLEEHDLSMRKLSECQSHLLALQ
KEKSVRIQRVLYSVNEVHTLCGVLGLDFSKTVSNVHPSLHETNPGQYTNISDSTSEGLDQ
AILGLKTERKVRYQKLKDVVGSLFELWNLMDTMREERSKLSRIISVLDISESEVVEPGVL
SLEVIQQVSAEVERLNKLKASRMKELVMKRRAELEDLCYKTHIQPDQSTAADKSSAMIDS
GLVDPCELLANIEAQINNVKDEALSRKEIMDRIERWLSACDEENWLEDYNRDHTRYSGGR
GAHINLKRAERARITVTKIPGMVDSLINKTLAWEDEKQKLFLYDGVRLVSILEDYKVSRH
QKEEEKKRARDQKKLQDMLLAEKESIYGSRPSPRRSSSFRKTNGYHANGNGSVTPSPRRN
SVGCATPELSTPRSYSGRQNTYFKEMRRLSTAPLNFVAIAKEDTMSFSSIGGSEPESPPQ
G

Transcript Sequence

Gene sequence data has not been registered.